OraRdkitCart: Rdkit chemical structure data cartridge for Oracle

OraRdkitCart is an Oracle data cartridge/extensible index to allow substructure and similarity searching using SQL queries on tables which contain indexed chemical structures.

It uses a Java RMI server and RDKit wrappers for chemical structure handling.

This software was developed with funding from Beacon Discovery and Glysade LLC.


  1. Satisfy Prerequisites
  2. Build Java code
  3. Install cartridge
  4. Test installation
  5. Run example SQL from the User Manual

All shell commands in the documentation should be run from project root.